J4_7MSH_016

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

7MSH|1|a|C|116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MSH|1|a|G|110
7MSH|1|a|A|111
7MSH|1|a|G|112
7MSH|1|a|U|113
7MSH|1|a|A|114
7MSH|1|a|A|115
7MSH|1|a|C|116
7MSH|1|a|A|117
7MSH|1|a|C|118
*
7MSH|1|a|G|237
7MSH|1|a|G|238
7MSH|1|a|C|239
*
7MSH|1|a|G|285
7MSH|1|a|U|286
7MSH|1|a|A|287
7MSH|1|a|G|288
*
7MSH|1|a|C|310
7MSH|1|a|C|311

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17