J4_7MT2_002

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GGAAG*UGCC*GAC*GGUAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7MT2_002 not in the Motif Atlas

Homologous match to J4_4WF9_002

Geometric discrepancy: 0.1474

The information below is about J4_4WF9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_16174.1

Basepair signature

cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

5

Unit IDs

7MT2|1|A|G|379
7MT2|1|A|G|380
7MT2|1|A|A|381
7MT2|1|A|A|382
7MT2|1|A|G|383
*
7MT2|1|A|U|399
7MT2|1|A|G|400
7MT2|1|A|C|401
7MT2|1|A|C|402
*
7MT2|1|A|G|406
7MT2|1|A|A|407
7MT2|1|A|C|408
*
7MT2|1|A|G|420
7MT2|1|A|G|421
7MT2|1|A|U|422
7MT2|1|A|A|423
7MT2|1|A|C|424

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24