J4_7MT7_002

3D structure

PDB id

7MT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P and E site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.71 Å

Loop

Sequence

GGAAG*UGCC*GAC*GGUAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7MT7_002 not in the Motif Atlas

Homologous match to J4_4WF9_002

Geometric discrepancy: 0.1414

The information below is about J4_4WF9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_71729.5

Basepair signature

cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW

Number of instances in this motif group

4

Unit IDs

7MT7|1|A|G|379
7MT7|1|A|G|380
7MT7|1|A|A|381
7MT7|1|A|A|382
7MT7|1|A|G|383
*
7MT7|1|A|U|399
7MT7|1|A|G|400
7MT7|1|A|C|401
7MT7|1|A|C|402
*
7MT7|1|A|G|406
7MT7|1|A|A|407
7MT7|1|A|C|408
*
7MT7|1|A|G|420
7MT7|1|A|G|421
7MT7|1|A|U|422
7MT7|1|A|A|423
7MT7|1|A|C|424

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24