J4_7N2V_012

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

7N2V|1|23|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N2V|1|23|C|1833
7N2V|1|23|U|1834
7N2V|1|23|2MG|1835
*
7N2V|1|23|C|1905
7N2V|1|23|G|1906
*
7N2V|1|23|C|1924
7N2V|1|23|C|1925
7N2V|1|23|U|1926
7N2V|1|23|A|1927
7N2V|1|23|A|1928
7N2V|1|23|G|1929
7N2V|1|23|G|1930
7N2V|1|23|U|1931
7N2V|1|23|A|1932
7N2V|1|23|G|1933
*
7N2V|1|23|C|1967
7N2V|1|23|G|1968
7N2V|1|23|A|1969
7N2V|1|23|A|1970
7N2V|1|23|U|1971
7N2V|1|23|G|1972

Current chains

Chain 23

23S rRNA

Nearby chains

Chain 16

Small subunit ribosomal RNA; SSU rRNA

Chain LB

50S ribosomal protein L2