J4_7NFX_002

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

7NFX|1|5|C|216, 7NFX|1|5|C|217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|C|196
7NFX|1|5|A|197
7NFX|1|5|A|198
7NFX|1|5|G|199
*
7NFX|1|5|C|215
7NFX|1|5|C|216
7NFX|1|5|C|217
7NFX|1|5|A|218
7NFX|1|5|G|219
7NFX|1|5|C|220
7NFX|1|5|C|221
7NFX|1|5|C|222
*
7NFX|1|5|G|226
7NFX|1|5|A|227
7NFX|1|5|C|228
*
7NFX|1|5|G|240
7NFX|1|5|G|241
7NFX|1|5|U|242
7NFX|1|5|A|243
7NFX|1|5|G|244

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain Y

Ribosomal protein L26