J4_7NFX_005

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

7NFX|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|G|2618
7NFX|1|5|G|2619
*
7NFX|1|5|U|2637
7NFX|1|5|G|2638
7NFX|1|5|U|2639
7NFX|1|5|G|2640
7NFX|1|5|A|2641
7NFX|1|5|A|2642
*
7NFX|1|5|U|2692
7NFX|1|5|G|2693
7NFX|1|5|G|2694
7NFX|1|5|A|2695
7NFX|1|5|A|2696
7NFX|1|5|A|2697
7NFX|1|5|G|2698
*
7NFX|1|5|U|2718
7NFX|1|5|C|2719

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

60S RIBOSOMAL PROTEIN EL19

Chain U

Ribosomal protein L22

Chain g

60S ribosomal protein L34

Chain k

eL38