J4_7NFX_007

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUG*CGG*UCUUAAGGUAG*UGAAUG

Length

23 nucleotides

Bulged bases

7NFX|1|5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|C|3696
7NFX|1|5|U|3697
7NFX|1|5|G|3698
*
7NFX|1|5|C|3752
7NFX|1|5|G|3753
7NFX|1|5|G|3754
*
7NFX|1|5|U|3770
7NFX|1|5|C|3771
7NFX|1|5|U|3772
7NFX|1|5|U|3773
7NFX|1|5|A|3774
7NFX|1|5|A|3775
7NFX|1|5|G|3776
7NFX|1|5|G|3777
7NFX|1|5|U|3778
7NFX|1|5|A|3779
7NFX|1|5|G|3780
*
7NFX|1|5|U|3814
7NFX|1|5|G|3815
7NFX|1|5|A|3816
7NFX|1|5|A|3817
7NFX|1|5|U|3818
7NFX|1|5|G|3819

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

uL2

Chain n

60s ribosomal protein l41