J4_7NFX_008

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

7NFX|1|5|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|C|4231
7NFX|1|5|U|4232
7NFX|1|5|A|4233
7NFX|1|5|A|4234
7NFX|1|5|G|4235
*
7NFX|1|5|U|4289
7NFX|1|5|U|4290
7NFX|1|5|G|4291
*
7NFX|1|5|C|4318
7NFX|1|5|C|4319
*
7NFX|1|5|G|4328
7NFX|1|5|G|4329
7NFX|1|5|G|4330

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain D

60S ribosomal protein L5

Chain T

eL21

Chain o

eL42