J4_7NHK_002
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAG*CGCU*GAG*CGUAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7NHK_002 not in the Motif Atlas
- Homologous match to J4_5J7L_019
- Geometric discrepancy: 0.1194
- The information below is about J4_5J7L_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_71729.5
- Basepair signature
- cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NHK|1|A|U|333
7NHK|1|A|G|334
7NHK|1|A|A|335
7NHK|1|A|A|336
7NHK|1|A|G|337
*
7NHK|1|A|C|352
7NHK|1|A|G|353
7NHK|1|A|C|354
7NHK|1|A|U|355
*
7NHK|1|A|G|359
7NHK|1|A|A|360
7NHK|1|A|G|361
*
7NHK|1|A|C|373
7NHK|1|A|G|374
7NHK|1|A|U|375
7NHK|1|A|A|376
7NHK|1|A|G|377
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L4
- Chain X
- 50S ribosomal protein L24
Coloring options: