J4_7NHK_013

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGUAACAC*GGU*AUAG*CC

Length

18 nucleotides

Bulged bases

7NHK|1|a|C|137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHK|1|a|G|131
7NHK|1|a|A|132
7NHK|1|a|G|133
7NHK|1|a|U|134
7NHK|1|a|A|135
7NHK|1|a|A|136
7NHK|1|a|C|137
7NHK|1|a|A|138
7NHK|1|a|C|139
*
7NHK|1|a|G|264
7NHK|1|a|G|265
7NHK|1|a|U|266
*
7NHK|1|a|A|312
7NHK|1|a|U|313
7NHK|1|a|A|314
7NHK|1|a|G|315
*
7NHK|1|a|C|337
7NHK|1|a|C|338

Current chains

Chain a

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S12

Chain q

30S ribosomal protein S16

Chain r

30S ribosomal protein S17