J4_7NHK_014

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAG*CAUAACAGU*GAGUGAAAG*CGC

Length

24 nucleotides

Bulged bases

7NHK|1|a|C|200, 7NHK|1|a|A|229

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHK|1|a|G|159
7NHK|1|a|A|160
7NHK|1|a|G|161
*
7NHK|1|a|C|195
7NHK|1|a|A|196
7NHK|1|a|U|197
7NHK|1|a|A|198
7NHK|1|a|A|199
7NHK|1|a|C|200
7NHK|1|a|A|201
7NHK|1|a|G|202
7NHK|1|a|U|203
*
7NHK|1|a|G|222
7NHK|1|a|A|223
7NHK|1|a|G|224
7NHK|1|a|U|225
7NHK|1|a|G|226
7NHK|1|a|A|227
7NHK|1|a|A|228
7NHK|1|a|A|229
7NHK|1|a|G|230
*
7NHK|1|a|C|245
7NHK|1|a|G|246
7NHK|1|a|C|247

Current chains

Chain a

16S rRNA

Nearby chains

Chain u

30S ribosomal protein S20