J4_7NQL_006

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CACGCUUACA*UAAUUAAC*GUUAACC*GAG

Length

28 nucleotides

Bulged bases

7NQL|1|BA|U|705, 7NQL|1|BA|A|707, 7NQL|1|BA|A|757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NQL|1|BA|C|669
7NQL|1|BA|A|670
7NQL|1|BA|C|671
7NQL|1|BA|G|672
7NQL|1|BA|C|673
7NQL|1|BA|U|674
7NQL|1|BA|U|675
7NQL|1|BA|A|676
7NQL|1|BA|C|677
7NQL|1|BA|A|678
*
7NQL|1|BA|U|701
7NQL|1|BA|A|702
7NQL|1|BA|A|703
7NQL|1|BA|U|704
7NQL|1|BA|U|705
7NQL|1|BA|A|706
7NQL|1|BA|A|707
7NQL|1|BA|C|708
*
7NQL|1|BA|G|753
7NQL|1|BA|U|754
7NQL|1|BA|U|755
7NQL|1|BA|A|756
7NQL|1|BA|A|757
7NQL|1|BA|C|758
7NQL|1|BA|C|759
*
7NQL|1|BA|G|768
7NQL|1|BA|A|769
7NQL|1|BA|G|770

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B2

Mitochondrial ribosomal protein L47

Chain B7

Mitochondrial ribosomal protein L34

Chain BX

uL23m

Chain Be

Mitochondrial ribosomal protein L41

Chain Bw

39S ribosomal protein S30, mitochondrial