J4_7NSI_005

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CACGCUUACA*UAAUUAAC*GUUAACC*GAG

Length

28 nucleotides

Bulged bases

7NSI|1|BA|U|705, 7NSI|1|BA|A|707, 7NSI|1|BA|A|757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NSI|1|BA|C|669
7NSI|1|BA|A|670
7NSI|1|BA|C|671
7NSI|1|BA|G|672
7NSI|1|BA|C|673
7NSI|1|BA|U|674
7NSI|1|BA|U|675
7NSI|1|BA|A|676
7NSI|1|BA|C|677
7NSI|1|BA|A|678
*
7NSI|1|BA|U|701
7NSI|1|BA|A|702
7NSI|1|BA|A|703
7NSI|1|BA|U|704
7NSI|1|BA|U|705
7NSI|1|BA|A|706
7NSI|1|BA|A|707
7NSI|1|BA|C|708
*
7NSI|1|BA|G|753
7NSI|1|BA|U|754
7NSI|1|BA|U|755
7NSI|1|BA|A|756
7NSI|1|BA|A|757
7NSI|1|BA|C|758
7NSI|1|BA|C|759
*
7NSI|1|BA|G|768
7NSI|1|BA|A|769
7NSI|1|BA|G|770

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B2

Mitochondrial ribosomal protein L47

Chain B7

39S ribosomal protein L34, mitochondrial

Chain BX

39S ribosomal protein L23, mitochondrial

Chain Be

Mitochondrial ribosomal protein L41

Chain Bw

39S ribosomal protein S30, mitochondrial