J4_7NSI_006

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GCCUG*CAUCAC*GCAAUG*CCACAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NSI|1|BA|G|824
7NSI|1|BA|C|825
7NSI|1|BA|C|826
7NSI|1|BA|U|827
7NSI|1|BA|G|828
*
7NSI|1|BA|C|840
7NSI|1|BA|A|841
7NSI|1|BA|U|842
7NSI|1|BA|C|843
7NSI|1|BA|A|844
7NSI|1|BA|C|845
*
7NSI|1|BA|G|869
7NSI|1|BA|C|870
7NSI|1|BA|A|871
7NSI|1|BA|A|872
7NSI|1|BA|U|873
7NSI|1|BA|G|874
*
7NSI|1|BA|C|969
7NSI|1|BA|C|970
7NSI|1|BA|A|971
7NSI|1|BA|C|972
7NSI|1|BA|A|973
7NSI|1|BA|C|974

Current chains

Chain BA

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain An

Aurora kinase A interacting protein 1

Chain BD

Ribosomal_L2_C domain-containing protein