J4_7NWI_004
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- UCUC*GCCGG*CCACGCGCGC*GGCGGAGCGA
- Length
- 29 nucleotides
- Bulged bases
- 7NWI|1|5|C|1237
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|5|U|980
7NWI|1|5|C|981
7NWI|1|5|U|982
7NWI|1|5|C|983
*
7NWI|1|5|G|1070
7NWI|1|5|C|1071
7NWI|1|5|C|1072
7NWI|1|5|G|1073
7NWI|1|5|G|1074
*
7NWI|1|5|C|1236
7NWI|1|5|C|1237
7NWI|1|5|A|1238
7NWI|1|5|C|1239
7NWI|1|5|G|1240
7NWI|1|5|C|1241
7NWI|1|5|G|1242
7NWI|1|5|C|1243
7NWI|1|5|G|1244
7NWI|1|5|C|1245
*
7NWI|1|5|G|1265
7NWI|1|5|G|1266
7NWI|1|5|C|1267
7NWI|1|5|G|1268
7NWI|1|5|G|1269
7NWI|1|5|A|1270
7NWI|1|5|G|1271
7NWI|1|5|C|1272
7NWI|1|5|G|1273
7NWI|1|5|A|1274
Current chains
- Chain 5
- 28S ribosomal RNA+BlaS
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
Coloring options: