J4_7NWI_007
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GGAGAUGG*CCAGUG*CGACC*GAGGGUGUAAAUCUC
- Length
- 34 nucleotides
- Bulged bases
- 7NWI|1|5|C|2768
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|5|G|2549
7NWI|1|5|G|2550
7NWI|1|5|A|2551
7NWI|1|5|G|2552
7NWI|1|5|A|2553
7NWI|1|5|U|2554
7NWI|1|5|G|2555
7NWI|1|5|G|2556
*
7NWI|1|5|C|2571
7NWI|1|5|C|2572
7NWI|1|5|A|2573
7NWI|1|5|G|2574
7NWI|1|5|U|2575
7NWI|1|5|G|2576
*
7NWI|1|5|C|2585
7NWI|1|5|G|2586
7NWI|1|5|A|2587
7NWI|1|5|C|2588
7NWI|1|5|C|2589
*
7NWI|1|5|G|2756
7NWI|1|5|A|2757
7NWI|1|5|G|2758
7NWI|1|5|G|2759
7NWI|1|5|G|2760
7NWI|1|5|U|2761
7NWI|1|5|G|2762
7NWI|1|5|U|2763
7NWI|1|5|A|2764
7NWI|1|5|A|2765
7NWI|1|5|A|2766
7NWI|1|5|U|2767
7NWI|1|5|C|2768
7NWI|1|5|U|2769
7NWI|1|5|C|2770
Current chains
- Chain 5
- 28S ribosomal RNA+BlaS
Nearby chains
- Chain Z
- 60S ribosomal protein L27
- Chain g
- 60S ribosomal protein L34
Coloring options: