J4_7NWI_010
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CUG*CGG*UCUUAAGGUAG*UGAAUG
- Length
- 23 nucleotides
- Bulged bases
- 7NWI|1|5|U|3818
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|5|C|3696
7NWI|1|5|U|3697
7NWI|1|5|G|3698
*
7NWI|1|5|C|3752
7NWI|1|5|G|3753
7NWI|1|5|G|3754
*
7NWI|1|5|U|3770
7NWI|1|5|C|3771
7NWI|1|5|U|3772
7NWI|1|5|U|3773
7NWI|1|5|A|3774
7NWI|1|5|A|3775
7NWI|1|5|G|3776
7NWI|1|5|G|3777
7NWI|1|5|U|3778
7NWI|1|5|A|3779
7NWI|1|5|G|3780
*
7NWI|1|5|U|3814
7NWI|1|5|G|3815
7NWI|1|5|A|3816
7NWI|1|5|A|3817
7NWI|1|5|U|3818
7NWI|1|5|G|3819
Current chains
- Chain 5
- 28S ribosomal RNA+BlaS
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain A
- L8
- Chain n
- 60s ribosomal protein l41
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