3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CAAG*CGAAG*CGAG*CGUUAAG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_7O1A_007 not in the Motif Atlas
Homologous match to J4_5J7L_020
Geometric discrepancy: 0.1621
The information below is about J4_5J7L_020
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_60168.1
Basepair signature
cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
Number of instances in this motif group
2

Unit IDs

7O1A|1|BA|C|601
7O1A|1|BA|A|602
7O1A|1|BA|A|603
7O1A|1|BA|G|604
*
7O1A|1|BA|C|624
7O1A|1|BA|G|625
7O1A|1|BA|A|626
7O1A|1|BA|A|627
7O1A|1|BA|G|628
*
7O1A|1|BA|C|635
7O1A|1|BA|G|636
7O1A|1|BA|A|637
7O1A|1|BA|G|638
*
7O1A|1|BA|C|650
7O1A|1|BA|G|651
7O1A|1|BA|U|652
7O1A|1|BA|U|653
7O1A|1|BA|A|654
7O1A|1|BA|A|655
7O1A|1|BA|G|656

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BE
50S ribosomal protein L4
Chain BL
50S ribosomal protein L15

Coloring options:


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