J4_7O5B_001

3D structure

PDB id

7O5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

7O5B|1|A|C|119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O5B|1|A|G|113
7O5B|1|A|A|114
7O5B|1|A|G|115
7O5B|1|A|U|116
7O5B|1|A|A|117
7O5B|1|A|A|118
7O5B|1|A|C|119
7O5B|1|A|A|120
7O5B|1|A|C|121
*
7O5B|1|A|G|246
7O5B|1|A|G|247
7O5B|1|A|C|248
*
7O5B|1|A|G|294
7O5B|1|A|U|295
7O5B|1|A|A|296
7O5B|1|A|G|297
*
7O5B|1|A|C|319
7O5B|1|A|C|320

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain L

30S ribosomal protein S12

Chain P

30S ribosomal protein S16

Chain Q

30S ribosomal protein S17