3D structure

PDB id
7O9K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CAUG*CU*AAAG*CAG
Length
13 nucleotides
Bulged bases
7O9K|1|A|U|2316, 7O9K|1|A|A|2452
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7O9K|1|A|C|2314
7O9K|1|A|A|2315
7O9K|1|A|U|2316
7O9K|1|A|G|2317
*
7O9K|1|A|C|2326
7O9K|1|A|U|2327
*
7O9K|1|A|A|2450
7O9K|1|A|A|2451
7O9K|1|A|A|2452
7O9K|1|A|G|2453
*
7O9K|1|A|C|2671
7O9K|1|A|A|2672
7O9K|1|A|G|2673

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain O
39S ribosomal protein L17, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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