3D structure

PDB id
7O9M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GCCUG*CAUCAC*GCACCG*CUCCAC
Length
23 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7O9M|1|A|G|2492
7O9M|1|A|C|2493
7O9M|1|A|C|2494
7O9M|1|A|U|2495
7O9M|1|A|G|2496
*
7O9M|1|A|C|2508
7O9M|1|A|A|2509
7O9M|1|A|U|2510
7O9M|1|A|C|2511
7O9M|1|A|A|2512
7O9M|1|A|C|2513
*
7O9M|1|A|G|2537
7O9M|1|A|C|2538
7O9M|1|A|A|2539
7O9M|1|A|C|2540
7O9M|1|A|C|2541
7O9M|1|A|G|2542
*
7O9M|1|A|C|2637
7O9M|1|A|U|2638
7O9M|1|A|C|2639
7O9M|1|A|C|2640
7O9M|1|A|A|2641
7O9M|1|A|C|2642

Current chains

Chain A
16S rRNA

Nearby chains

Chain C
Mitochondrial ribosome-associated GTPase 1
Chain D
39S ribosomal protein L2, mitochondrial
Chain n
rRNA methyltransferase 2, mitochondrial

Coloring options:

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