J4_7ODR_002
3D structure
- PDB id
- 7ODR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State A of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA
- Length
- 28 nucleotides
- Bulged bases
- 7ODR|1|A|U|2372, 7ODR|1|A|A|2374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ODR|1|A|U|2336
7ODR|1|A|A|2337
7ODR|1|A|A|2338
7ODR|1|A|G|2339
7ODR|1|A|C|2340
7ODR|1|A|C|2341
7ODR|1|A|U|2342
7ODR|1|A|G|2343
7ODR|1|A|C|2344
7ODR|1|A|G|2345
*
7ODR|1|A|C|2368
7ODR|1|A|A|2369
7ODR|1|A|A|2370
7ODR|1|A|U|2371
7ODR|1|A|U|2372
7ODR|1|A|A|2373
7ODR|1|A|A|2374
7ODR|1|A|C|2375
*
7ODR|1|A|G|2421
7ODR|1|A|U|2422
7ODR|1|A|C|2423
7ODR|1|A|A|2424
7ODR|1|A|A|2425
7ODR|1|A|C|2426
7ODR|1|A|C|2427
*
7ODR|1|A|G|2436
7ODR|1|A|C|2437
7ODR|1|A|A|2438
Current chains
- Chain A
- 16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: