J4_7ODR_003

3D structure

PDB id

7ODR (explore in PDB, NAKB, or RNA 3D Hub)

Description

State A of the human mitoribosomal large subunit assembly intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODR|1|A|G|2492
7ODR|1|A|C|2493
7ODR|1|A|C|2494
7ODR|1|A|U|2495
7ODR|1|A|G|2496
*
7ODR|1|A|C|2508
7ODR|1|A|A|2509
7ODR|1|A|U|2510
7ODR|1|A|C|2511
7ODR|1|A|A|2512
7ODR|1|A|C|2513
*
7ODR|1|A|G|2537
7ODR|1|A|C|2538
7ODR|1|A|A|2539
7ODR|1|A|C|2540
7ODR|1|A|C|2541
7ODR|1|A|G|2542
*
7ODR|1|A|C|2637
7ODR|1|A|U|2638
7ODR|1|A|C|2639
7ODR|1|A|C|2640
7ODR|1|A|A|2641
7ODR|1|A|C|2642

Current chains

Chain A

16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial