J4_7ODR_004
3D structure
- PDB id
- 7ODR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State A of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAG*CAC*GAGAUUU*ACCG
- Length
- 19 nucleotides
- Bulged bases
- 7ODR|1|B|U|1609, 7ODR|1|B|U|1646
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ODR|1|B|U|1607
7ODR|1|B|G|1608
7ODR|1|B|U|1609
7ODR|1|B|A|1610
7ODR|1|B|G|1611
*
7ODR|1|B|C|1624
7ODR|1|B|A|1625
7ODR|1|B|C|1626
*
7ODR|1|B|G|1642
7ODR|1|B|A|1643
7ODR|1|B|G|1644
7ODR|1|B|A|1645
7ODR|1|B|U|1646
7ODR|1|B|U|1647
7ODR|1|B|U|1648
*
7ODR|1|B|A|1661
7ODR|1|B|C|1662
7ODR|1|B|C|1663
7ODR|1|B|G|1664
Current chains
- Chain B
- mitochondrial tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
Coloring options: