J4_7ODS_003

3D structure

PDB id

7ODS (explore in PDB, NAKB, or RNA 3D Hub)

Description

State B of the human mitoribosomal large subunit assembly intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODS|1|A|G|2492
7ODS|1|A|C|2493
7ODS|1|A|C|2494
7ODS|1|A|U|2495
7ODS|1|A|G|2496
*
7ODS|1|A|C|2508
7ODS|1|A|A|2509
7ODS|1|A|U|2510
7ODS|1|A|C|2511
7ODS|1|A|A|2512
7ODS|1|A|C|2513
*
7ODS|1|A|G|2537
7ODS|1|A|C|2538
7ODS|1|A|A|2539
7ODS|1|A|C|2540
7ODS|1|A|C|2541
7ODS|1|A|G|2542
*
7ODS|1|A|C|2637
7ODS|1|A|U|2638
7ODS|1|A|C|2639
7ODS|1|A|C|2640
7ODS|1|A|A|2641
7ODS|1|A|C|2642

Current chains

Chain A

16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial

Chain z

rRNA methyltransferase 2, mitochondrial