J4_7ODT_001

3D structure

PDB id

7ODT (explore in PDB, NAKB, or RNA 3D Hub)

Description

State C of the human mitoribosomal large subunit assembly intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

7ODT|1|A|U|2316, 7ODT|1|A|A|2452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODT|1|A|C|2314
7ODT|1|A|A|2315
7ODT|1|A|U|2316
7ODT|1|A|G|2317
*
7ODT|1|A|C|2326
7ODT|1|A|U|2327
*
7ODT|1|A|A|2450
7ODT|1|A|A|2451
7ODT|1|A|A|2452
7ODT|1|A|G|2453
*
7ODT|1|A|C|2671
7ODT|1|A|A|2672
7ODT|1|A|G|2673

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial