J4_7ODT_003

3D structure

PDB id

7ODT (explore in PDB, NAKB, or RNA 3D Hub)

Description

State C of the human mitoribosomal large subunit assembly intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODT|1|A|G|2492
7ODT|1|A|C|2493
7ODT|1|A|C|2494
7ODT|1|A|U|2495
7ODT|1|A|G|2496
*
7ODT|1|A|C|2508
7ODT|1|A|A|2509
7ODT|1|A|U|2510
7ODT|1|A|C|2511
7ODT|1|A|A|2512
7ODT|1|A|C|2513
*
7ODT|1|A|G|2537
7ODT|1|A|C|2538
7ODT|1|A|A|2539
7ODT|1|A|C|2540
7ODT|1|A|C|2541
7ODT|1|A|G|2542
*
7ODT|1|A|C|2637
7ODT|1|A|U|2638
7ODT|1|A|C|2639
7ODT|1|A|C|2640
7ODT|1|A|A|2641
7ODT|1|A|C|2642

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial