J4_7ODT_005
3D structure
- PDB id
- 7ODT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State C of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA
- Length
- 28 nucleotides
- Bulged bases
- 7ODT|1|A|U|2372, 7ODT|1|A|A|2374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ODT|1|A|U|2336
7ODT|1|A|A|2337
7ODT|1|A|A|2338
7ODT|1|A|G|2339
7ODT|1|A|C|2340
7ODT|1|A|C|2341
7ODT|1|A|U|2342
7ODT|1|A|G|2343
7ODT|1|A|C|2344
7ODT|1|A|G|2345
*
7ODT|1|A|C|2368
7ODT|1|A|A|2369
7ODT|1|A|A|2370
7ODT|1|A|U|2371
7ODT|1|A|U|2372
7ODT|1|A|A|2373
7ODT|1|A|A|2374
7ODT|1|A|C|2375
*
7ODT|1|A|G|2421
7ODT|1|A|U|2422
7ODT|1|A|C|2423
7ODT|1|A|A|2424
7ODT|1|A|A|2425
7ODT|1|A|C|2426
7ODT|1|A|C|2427
*
7ODT|1|A|G|2436
7ODT|1|A|C|2437
7ODT|1|A|A|2438
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: