J4_7OF2_003

3D structure

PDB id

7OF2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OF2|1|A|G|2492
7OF2|1|A|C|2493
7OF2|1|A|C|2494
7OF2|1|A|U|2495
7OF2|1|A|G|2496
*
7OF2|1|A|C|2508
7OF2|1|A|A|2509
7OF2|1|A|U|2510
7OF2|1|A|C|2511
7OF2|1|A|A|2512
7OF2|1|A|C|2513
*
7OF2|1|A|G|2537
7OF2|1|A|C|2538
7OF2|1|A|A|2539
7OF2|1|A|C|2540
7OF2|1|A|C|2541
7OF2|1|A|G|2542
*
7OF2|1|A|C|2637
7OF2|1|A|U|2638
7OF2|1|A|C|2639
7OF2|1|A|C|2640
7OF2|1|A|A|2641
7OF2|1|A|C|2642

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial