J4_7OF7_003

3D structure

PDB id

7OF7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OF7|1|A|G|2492
7OF7|1|A|C|2493
7OF7|1|A|C|2494
7OF7|1|A|U|2495
7OF7|1|A|G|2496
*
7OF7|1|A|C|2508
7OF7|1|A|A|2509
7OF7|1|A|U|2510
7OF7|1|A|C|2511
7OF7|1|A|A|2512
7OF7|1|A|C|2513
*
7OF7|1|A|G|2537
7OF7|1|A|C|2538
7OF7|1|A|A|2539
7OF7|1|A|C|2540
7OF7|1|A|C|2541
7OF7|1|A|G|2542
*
7OF7|1|A|C|2637
7OF7|1|A|U|2638
7OF7|1|A|C|2639
7OF7|1|A|C|2640
7OF7|1|A|A|2641
7OF7|1|A|C|2642

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial