J4_7OID_003

3D structure

PDB id

7OID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OID|1|A|G|822
7OID|1|A|C|823
7OID|1|A|C|824
7OID|1|A|U|825
7OID|1|A|G|826
*
7OID|1|A|C|838
7OID|1|A|A|839
7OID|1|A|U|840
7OID|1|A|C|841
7OID|1|A|A|842
7OID|1|A|C|843
*
7OID|1|A|G|867
7OID|1|A|C|868
7OID|1|A|A|869
7OID|1|A|C|870
7OID|1|A|C|871
7OID|1|A|G|872
*
7OID|1|A|C|967
7OID|1|A|U|968
7OID|1|A|C|969
7OID|1|A|C|970
7OID|1|A|A|971
7OID|1|A|C|972

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial