J4_7OLC_010

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAA*UC*GCU*AUGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|1|G|2967
7OLC|1|1|U|2968
7OLC|1|1|A|2969
7OLC|1|1|A|2970
*
7OLC|1|1|U|3000
7OLC|1|1|C|3001
*
7OLC|1|1|G|3056
7OLC|1|1|C|3057
7OLC|1|1|U|3058
*
7OLC|1|1|A|3092
7OLC|1|1|U|3093
7OLC|1|1|G|3094
7OLC|1|1|C|3095

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3-like protein

Chain LO

60S ribosomal protein L16-like protein

Chain LV

60S ribosomal protein l23-like protein