J4_7OLC_015

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAG*CGCC*GAG*CGUAUA

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|1|U|180
7OLC|1|1|G|181
7OLC|1|1|A|182
7OLC|1|1|G|183
*
7OLC|1|1|C|199
7OLC|1|1|G|200
7OLC|1|1|C|201
7OLC|1|1|C|202
*
7OLC|1|1|G|206
7OLC|1|1|A|207
7OLC|1|1|G|208
*
7OLC|1|1|C|220
7OLC|1|1|G|221
7OLC|1|1|U|222
7OLC|1|1|A|223
7OLC|1|1|U|224
7OLC|1|1|A|225

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4-like protein

Chain LY

60S ribosomal protein L26-like protein