J4_7OLD_002
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUCUGAG*CGCC*GAG*CGUAUAGUUG
- Length
- 25 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OLD|1|1|C|176
7OLD|1|1|U|177
7OLD|1|1|U|178
7OLD|1|1|C|179
7OLD|1|1|U|180
7OLD|1|1|G|181
7OLD|1|1|A|182
7OLD|1|1|G|183
*
7OLD|1|1|C|199
7OLD|1|1|G|200
7OLD|1|1|C|201
7OLD|1|1|C|202
*
7OLD|1|1|G|206
7OLD|1|1|A|207
7OLD|1|1|G|208
*
7OLD|1|1|C|220
7OLD|1|1|G|221
7OLD|1|1|U|222
7OLD|1|1|A|223
7OLD|1|1|U|224
7OLD|1|1|A|225
7OLD|1|1|G|226
7OLD|1|1|U|227
7OLD|1|1|U|228
7OLD|1|1|G|229
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LY
- 60S ribosomal protein L26-like protein
- Chain Lj
- Ribosomal protein L37
Coloring options: