3D structure

PDB id
7P2E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CAAG*CGUUCCAG*CAC*GAAACAG
Length
22 nucleotides
Bulged bases
7P2E|1|A|U|711, 7P2E|1|A|C|815
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7P2E|1|A|C|698
7P2E|1|A|A|699
7P2E|1|A|A|700
7P2E|1|A|G|701
*
7P2E|1|A|C|708
7P2E|1|A|G|709
7P2E|1|A|U|710
7P2E|1|A|U|711
7P2E|1|A|C|712
7P2E|1|A|C|713
7P2E|1|A|A|714
7P2E|1|A|G|715
*
7P2E|1|A|C|800
7P2E|1|A|A|801
7P2E|1|A|C|802
*
7P2E|1|A|G|811
7P2E|1|A|A|812
7P2E|1|A|A|813
7P2E|1|A|A|814
7P2E|1|A|C|815
7P2E|1|A|A|816
7P2E|1|A|G|817

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 0
28S ribosomal protein S34, mitochondrial
Chain M
28S ribosomal protein S16, mitochondrial
Chain U
28S ribosomal protein S26, mitochondrial

Coloring options:

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