J4_7P48_006

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7P48|1|A|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P48|1|A|G|1347
7P48|1|A|U|1348
7P48|1|A|U|1349
7P48|1|A|U|1350
7P48|1|A|C|1351
*
7P48|1|A|G|1375
7P48|1|A|G|1376
7P48|1|A|U|1377
7P48|1|A|U|1378
7P48|1|A|A|1379
7P48|1|A|G|1380
*
7P48|1|A|C|1441
7P48|1|A|C|1442
*
7P48|1|A|G|1641
7P48|1|A|C|1642
7P48|1|A|C|1643
7P48|1|A|C|1644
7P48|1|A|G|1645
7P48|1|A|U|1646
7P48|1|A|A|1647
7P48|1|A|C|1648

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain R

50S ribosomal protein L23