J4_7P48_012

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGUAACAC*GCU*AUAG*CC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P48|1|a|G|114
7P48|1|a|A|115
7P48|1|a|G|116
7P48|1|a|U|117
7P48|1|a|A|118
7P48|1|a|A|119
7P48|1|a|C|120
7P48|1|a|A|121
7P48|1|a|C|122
*
7P48|1|a|G|246
7P48|1|a|C|247
7P48|1|a|U|248
*
7P48|1|a|A|294
7P48|1|a|U|295
7P48|1|a|A|296
7P48|1|a|G|297
*
7P48|1|a|C|319
7P48|1|a|C|320

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17