J4_7P48_013

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAC*GAUAAUAU*AAGUGAAAGACG*CUGUCAC

Length

30 nucleotides

Bulged bases

7P48|1|a|U|183, 7P48|1|a|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P48|1|a|G|142
7P48|1|a|A|143
7P48|1|a|C|144
*
7P48|1|a|G|178
7P48|1|a|A|179
7P48|1|a|U|180
7P48|1|a|A|181
7P48|1|a|A|182
7P48|1|a|U|183
7P48|1|a|A|184
7P48|1|a|U|185
*
7P48|1|a|A|205
7P48|1|a|A|206
7P48|1|a|G|207
7P48|1|a|U|208
7P48|1|a|G|209
7P48|1|a|A|210
7P48|1|a|A|211
7P48|1|a|A|212
7P48|1|a|G|213
7P48|1|a|A|214
7P48|1|a|C|215
7P48|1|a|G|216
*
7P48|1|a|C|223
7P48|1|a|U|224
7P48|1|a|G|225
7P48|1|a|U|226
7P48|1|a|C|227
7P48|1|a|A|228
7P48|1|a|C|229

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20