J4_7P48_015
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGGA*UACAAUGGA*UUCUCAGUUC*GCUGGAAU
- Length
- 32 nucleotides
- Bulged bases
- 7P48|1|a|U|1250, 7P48|1|a|U|1312
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7P48|1|a|G|951
7P48|1|a|U|952
7P48|1|a|G|953
7P48|1|a|G|954
7P48|1|a|A|955
*
7P48|1|a|U|1245
7P48|1|a|A|1246
7P48|1|a|C|1247
7P48|1|a|A|1248
7P48|1|a|A|1249
7P48|1|a|U|1250
7P48|1|a|G|1251
7P48|1|a|G|1252
7P48|1|a|A|1253
*
7P48|1|a|U|1304
7P48|1|a|U|1305
7P48|1|a|C|1306
7P48|1|a|U|1307
7P48|1|a|C|1308
7P48|1|a|A|1309
7P48|1|a|G|1310
7P48|1|a|U|1311
7P48|1|a|U|1312
7P48|1|a|C|1313
*
7P48|1|a|G|1344
7P48|1|a|C|1345
7P48|1|a|U|1346
7P48|1|a|G|1347
7P48|1|a|G|1348
7P48|1|a|A|1349
7P48|1|a|A|1350
7P48|1|a|U|1351
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 6
- ABC-F type ribosomal protection protein
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain m
- 30S ribosomal protein S13
Coloring options: