J4_7PD3_003

3D structure

PDB id

7PD3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CACCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PD3|1|A|G|2492
7PD3|1|A|C|2493
7PD3|1|A|C|2494
7PD3|1|A|U|2495
7PD3|1|A|G|2496
*
7PD3|1|A|C|2508
7PD3|1|A|A|2509
7PD3|1|A|U|2510
7PD3|1|A|C|2511
7PD3|1|A|A|2512
7PD3|1|A|C|2513
*
7PD3|1|A|G|2537
7PD3|1|A|C|2538
7PD3|1|A|A|2539
7PD3|1|A|C|2540
7PD3|1|A|C|2541
7PD3|1|A|G|2542
*
7PD3|1|A|C|2637
7PD3|1|A|A|2638
7PD3|1|A|C|2639
7PD3|1|A|C|2640
7PD3|1|A|A|2641
7PD3|1|A|C|2642

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial

Chain z

Mitochondrial ribosome-associated GTPase 1