J4_7PJS_012

3D structure

PDB id

7PJS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

7PJS|1|a|C|183, 7PJS|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJS|1|a|G|142
7PJS|1|a|A|143
7PJS|1|a|G|144
7PJS|1|a|G|145
7PJS|1|a|G|146
*
7PJS|1|a|C|176
7PJS|1|a|G|177
7PJS|1|a|C|178
7PJS|1|a|A|179
7PJS|1|a|U|180
7PJS|1|a|A|181
7PJS|1|a|A|182
7PJS|1|a|C|183
7PJS|1|a|G|184
*
7PJS|1|a|C|193
7PJS|1|a|C|194
7PJS|1|a|A|195
7PJS|1|a|A|196
7PJS|1|a|A|197
7PJS|1|a|G|198
*
7PJS|1|a|U|219
7PJS|1|a|G|220
7PJS|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains