J4_7PJT_011

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GAGGGG*CCGCAUAACG*CCAAAG*UGC

Length

25 nucleotides

Bulged bases

7PJT|1|a|C|183, 7PJT|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|a|G|142
7PJT|1|a|A|143
7PJT|1|a|G|144
7PJT|1|a|G|145
7PJT|1|a|G|146
7PJT|1|a|G|147
*
7PJT|1|a|C|175
7PJT|1|a|C|176
7PJT|1|a|G|177
7PJT|1|a|C|178
7PJT|1|a|A|179
7PJT|1|a|U|180
7PJT|1|a|A|181
7PJT|1|a|A|182
7PJT|1|a|C|183
7PJT|1|a|G|184
*
7PJT|1|a|C|193
7PJT|1|a|C|194
7PJT|1|a|A|195
7PJT|1|a|A|196
7PJT|1|a|A|197
7PJT|1|a|G|198
*
7PJT|1|a|U|219
7PJT|1|a|G|220
7PJT|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20