J4_7PJU_008

3D structure

PDB id

7PJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

CU(2MG)*CGG*CUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

7PJU|1|A|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJU|1|A|C|1833
7PJU|1|A|U|1834
7PJU|1|A|2MG|1835
*
7PJU|1|A|C|1905
7PJU|1|A|G|1906
7PJU|1|A|G|1907
*
7PJU|1|A|C|1925
7PJU|1|A|U|1926
7PJU|1|A|A|1927
7PJU|1|A|A|1928
7PJU|1|A|G|1929
7PJU|1|A|G|1930
7PJU|1|A|U|1931
7PJU|1|A|A|1932
7PJU|1|A|G|1933
*
7PJU|1|A|C|1967
7PJU|1|A|G|1968
7PJU|1|A|A|1969
7PJU|1|A|A|1970
7PJU|1|A|U|1971
7PJU|1|A|G|1972

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA