J4_7PJU_012

3D structure

PDB id

7PJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

7PJU|1|a|C|183, 7PJU|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJU|1|a|G|142
7PJU|1|a|A|143
7PJU|1|a|G|144
7PJU|1|a|G|145
7PJU|1|a|G|146
*
7PJU|1|a|C|176
7PJU|1|a|G|177
7PJU|1|a|C|178
7PJU|1|a|A|179
7PJU|1|a|U|180
7PJU|1|a|A|181
7PJU|1|a|A|182
7PJU|1|a|C|183
7PJU|1|a|G|184
*
7PJU|1|a|C|193
7PJU|1|a|C|194
7PJU|1|a|A|195
7PJU|1|a|A|196
7PJU|1|a|A|197
7PJU|1|a|G|198
*
7PJU|1|a|U|219
7PJU|1|a|G|220
7PJU|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20