J4_7PJW_010

3D structure

PDB id

7PJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

7PJW|1|a|C|183, 7PJW|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJW|1|a|G|142
7PJW|1|a|A|143
7PJW|1|a|G|144
7PJW|1|a|G|145
7PJW|1|a|G|146
*
7PJW|1|a|C|176
7PJW|1|a|G|177
7PJW|1|a|C|178
7PJW|1|a|A|179
7PJW|1|a|U|180
7PJW|1|a|A|181
7PJW|1|a|A|182
7PJW|1|a|C|183
7PJW|1|a|G|184
*
7PJW|1|a|C|193
7PJW|1|a|C|194
7PJW|1|a|A|195
7PJW|1|a|A|196
7PJW|1|a|A|197
7PJW|1|a|G|198
*
7PJW|1|a|U|219
7PJW|1|a|G|220
7PJW|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20