J4_7PJX_012

3D structure

PDB id

7PJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

7PJX|1|a|C|183, 7PJX|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJX|1|a|G|142
7PJX|1|a|A|143
7PJX|1|a|G|144
7PJX|1|a|G|145
7PJX|1|a|G|146
*
7PJX|1|a|C|176
7PJX|1|a|G|177
7PJX|1|a|C|178
7PJX|1|a|A|179
7PJX|1|a|U|180
7PJX|1|a|A|181
7PJX|1|a|A|182
7PJX|1|a|C|183
7PJX|1|a|G|184
*
7PJX|1|a|C|193
7PJX|1|a|C|194
7PJX|1|a|A|195
7PJX|1|a|A|196
7PJX|1|a|A|197
7PJX|1|a|G|198
*
7PJX|1|a|U|219
7PJX|1|a|G|220
7PJX|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20