3D structure

PDB id
7PNY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b
Experimental method
ELECTRON MICROSCOPY
Resolution
3.06 Å

Loop

Sequence
CAAG*CGUUCCAG*CAC*GAAACAG
Length
22 nucleotides
Bulged bases
7PNY|1|A|U|711, 7PNY|1|A|C|815
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PNY|1|A|C|698
7PNY|1|A|A|699
7PNY|1|A|A|700
7PNY|1|A|G|701
*
7PNY|1|A|C|708
7PNY|1|A|G|709
7PNY|1|A|U|710
7PNY|1|A|U|711
7PNY|1|A|C|712
7PNY|1|A|C|713
7PNY|1|A|A|714
7PNY|1|A|G|715
*
7PNY|1|A|C|800
7PNY|1|A|A|801
7PNY|1|A|C|802
*
7PNY|1|A|G|811
7PNY|1|A|A|812
7PNY|1|A|A|813
7PNY|1|A|A|814
7PNY|1|A|C|815
7PNY|1|A|A|816
7PNY|1|A|G|817

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 0
28S ribosomal protein S34, mitochondrial
Chain M
28S ribosomal protein S16, mitochondrial
Chain U
28S ribosomal protein S26, mitochondrial

Coloring options:

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