J4_7PNY_002

3D structure

PDB id

7PNY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GAGUUCAC*GACA*UAG*CC

Length

17 nucleotides

Bulged bases

7PNY|1|A|C|722

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PNY|1|A|G|717
7PNY|1|A|A|718
7PNY|1|A|G|719
7PNY|1|A|U|720
7PNY|1|A|U|721
7PNY|1|A|C|722
7PNY|1|A|A|723
7PNY|1|A|C|724
*
7PNY|1|A|G|750
7PNY|1|A|A|751
7PNY|1|A|C|752
7PNY|1|A|A|753
*
7PNY|1|A|U|789
7PNY|1|A|A|790
7PNY|1|A|G|791
*
7PNY|1|A|C|797
7PNY|1|A|C|798

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 0

28S ribosomal protein S34, mitochondrial

Chain M

28S ribosomal protein S16, mitochondrial

Chain N

28S ribosomal protein S17, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial