3D structure

PDB id
7PNZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c
Experimental method
ELECTRON MICROSCOPY
Resolution
3.09 Å

Loop

Sequence
GAGUUCAC*GACA*UAG*CC
Length
17 nucleotides
Bulged bases
7PNZ|1|A|C|722
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PNZ|1|A|G|717
7PNZ|1|A|A|718
7PNZ|1|A|G|719
7PNZ|1|A|U|720
7PNZ|1|A|U|721
7PNZ|1|A|C|722
7PNZ|1|A|A|723
7PNZ|1|A|C|724
*
7PNZ|1|A|G|750
7PNZ|1|A|A|751
7PNZ|1|A|C|752
7PNZ|1|A|A|753
*
7PNZ|1|A|U|789
7PNZ|1|A|A|790
7PNZ|1|A|G|791
*
7PNZ|1|A|C|797
7PNZ|1|A|C|798

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 0
28S ribosomal protein S34, mitochondrial
Chain M
28S ribosomal protein S16, mitochondrial
Chain N
28S ribosomal protein S17, mitochondrial
Chain T
28S ribosomal protein S25, mitochondrial

Coloring options:

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