3D structure

PDB id
7PO0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CAAG*CGUUCCAG*CAC*GAAACAG
Length
22 nucleotides
Bulged bases
7PO0|1|A|U|711, 7PO0|1|A|C|815
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PO0|1|A|C|698
7PO0|1|A|A|699
7PO0|1|A|A|700
7PO0|1|A|G|701
*
7PO0|1|A|C|708
7PO0|1|A|G|709
7PO0|1|A|U|710
7PO0|1|A|U|711
7PO0|1|A|C|712
7PO0|1|A|C|713
7PO0|1|A|A|714
7PO0|1|A|G|715
*
7PO0|1|A|C|800
7PO0|1|A|A|801
7PO0|1|A|C|802
*
7PO0|1|A|G|811
7PO0|1|A|A|812
7PO0|1|A|A|813
7PO0|1|A|A|814
7PO0|1|A|C|815
7PO0|1|A|A|816
7PO0|1|A|G|817

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 0
28S ribosomal protein S34, mitochondrial
Chain M
28S ribosomal protein S16, mitochondrial
Chain U
28S ribosomal protein S26, mitochondrial

Coloring options:

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